Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs6151619 | chr5:79961675 | C/T | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
KIRP | rs6151622 | chr5:79961856 | AT/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
KIRP | rs6151632 | chr5:79966679 | T/C | 0.00068 | 213 | 19.3 | 14.87 | 9.77 | KM Plot |
KIRP | rs6151633 | chr5:79966766 | G/C | 0.00068 | 213 | 19.3 | 14.87 | 9.77 | KM Plot |
KIRP | rs61660752 | chr16:4530224 | C/T | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
KIRP | rs61742093 | chr6:27879982 | A/G | 2.42E-7 | 210 | 15.33 | 15.02 | 9.77 | KM Plot |
KIRP | rs61798916 | chr1:89493957 | G/A | 1.77E-5 | 210 | 16.68 | 15.9 | 10.72 | KM Plot |
KIRP | rs61798920 | chr1:89517119 | C/T | 7.21E-5 | 211 | 19.27 | 16.43 | 10.83 | KM Plot |
KIRP | rs61798936 | chr1:89525820 | C/T | 9.07E-5 | 203 | 16.97 | 19 | 9.77 | KM Plot |
KIRP | rs61798944 | chr1:89540807 | A/G | 9.75E-5 | 208 | 16.45 | 19 | 9.38 | KM Plot |
KIRP | rs61798947 | chr1:89557064 | C/T | 0.000131 | 208 | 16.43 | 19.53 | 10 | KM Plot |
KIRP | rs61848333 | chr10:12273969 | C/T | 1.21E-5 | 210 | 16.43 | 16.93 | 9.07 | KM Plot |
KIRP | rs61984520 | chr14:59816182 | C/G | 7.58E-5 | 211 | 14.87 | 19.4 | 11.2 | KM Plot |
KIRP | rs61984521 | chr14:59820189 | C/T | 0.000369 | 211 | 14.87 | 19.4 | 11.2 | KM Plot |
KIRP | rs61984524 | chr14:59824249 | C/G | 0.000195 | 213 | 14.87 | 19.4 | 11.2 | KM Plot |